CDS

Accession Number TCMCG057C35290
gbkey CDS
Protein Id XP_018440442.1
Location complement(join(38880986..38881198,38881285..38881411,38881480..38881718,38881808..38882022,38882116..38882563,38882635..38882788,38882984..38883093,38883235..38883492,38883745..38883798,38883904..38884014,38884113..38884268,38884371..38884740,38884837..38884904,38885277..38885387,38885503..38885703,38885779..38885880,38885993..38886100,38886174..38886364,38886446..38886524,38886625..38886693,38886788..38887048,38887162..38887422,38887712..38887846))
Gene LOC108812628
GeneID 108812628
Organism Raphanus sativus

Protein

Length 1346aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018584940.1
Definition PREDICTED: DExH-box ATP-dependent RNA helicase DExH11 isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description DSHCT
KEGG_TC -
KEGG_Module M00392        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12599        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0006813        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015672        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0030001        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035864        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055087        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAACAGATTCGAAGCAGCTAACGAGCTCGCCTTCCGTGTCGGAATCTCCGGCCACGGCGGTCACCTCCGCGTCGAGCCTCTGTACACTGCGGAGAGCGACGTCGCAGTGAACTCACTTCCCGATTTCGTCTCCCCTCCTGCGTTTGCTAAGGAAACAAAAGAGTCGATAAAGGAACATATCGAGGAGAAATATCTCCTCCCAAGACTGGAACCTGAACAGTTCTCTGCTGAAAACGCTGAGAATCAGTGGGATTTTGACTGGTTTGCTAGGGTGAAGGTGCCTCTTCAACCTTCTTTGCCCAGGTCCGTTGTAGTTCCAACTTGGGAATTGCCATTCAGGCGTCAGAAATTGGATACTGAAAGAAACGGAAGATGGGAGCCAAAGTCAGTGGAGGTGGATTTATCAGAACAAATGTATGGAGATCAAGATTCTGGATTTTTTCCTCGAATGGTGGGACCTCCAAAGGATTTTCTGAGAGGGAGCGCCAATAATCGCCCTTTCCGTCCAGGTGGCTTGGAGGATTCACAGTCTTCAGAGAGGATCCTTCCAGATGGTGTATGTGACGGCCGATGGGTACGGGAATTGCTCAATGGAGGTCCTGCTCAGAACGTTCCTCCTAGTTTCAAGCAGAGTTTAGATCTTGGAGATCTCATGCCACATCCCCAAGCATGGAATGTTTATGAGGATCAGAGTTTACATGGAAATGCATCAGATGAAAAGTCGAGCAAGTTGTCTATACAATTTGATGATCTATTCAAGACGGTTTTGGAAGAAGATACTGTCTTCGAACTTGAGGGAGACGATCACTCCGCAGGATCTGAGTCTCCAAAGGCAGAAGCTGAACCTGAACCTGAAGCGAGCAAAGGTAGAGAAACCATCAAGGGGACAGAGACTGACATCACCGTCCTGGATGAGATTTTGTCATCAGCTAAAACAGCAATATTGTCGGATGAAGCAATTACTGGGAACAATGGCAAACAATTACGGAAAGAGGGATGGGCCACTAAAGGAGATAGCCAAGACATTGCAGACCGGTTCCATGAGCTTGTTCCTGACATGGCGATGGAGTTCCCTTTCGAATTGGACATCTTTCAGAAGGAGGCCATCTGTTGTTTAGAAAAGGGGGAGTCTGTTTTTGTAGCAGCCCATACATCAGCAGGAAAGACCGTTGTTGCAGAATATGCATTCGCTTTGGCTACCAAGCATTGTACACGAGCTGTTTATACTGCCCCAATTAAAACCATCAGCAACCAAAAATACAGAGACTTTTGTGGGAAGTTTGATGTAGGACTTCTCACGGGTGATGTTAGCATAAGGCCAGAGGCATCTTGTCTGATCATGACTACAGAAATATTAAGGTCAATGCTGTACCGTGGTGCTGATATCATACGTGATATAGAATGGGTTGTATTTGATGAAGTTCACTATGTCAATGACGTAGAAAGAGGGGTTGTTTGGGAAGAAGTCATCATCATGTTGCCAAGGCATATAAATTTTGTCCTTCTTTCTGCAACGGTGCCTAACACATTTGAATTTGCTGACTGGATTGGCCGAACAAAACAAAAAGAGATACGTGTTACTGGCACAACAAAAAGACCAGTTCCTCTAGAGCATTGCCTATTTTATTCTGGCGAACTCTACAAAGTTTGTGAGAATGAAGTTTTTATTTCTAAAGGGATAAAGGATGCTAAAGATGCACACAAGAAGAAGAATTCAAGTGCAGTTAGTGTCGGTCCTAAACAGTACACGGGATCTTCAGCTCATCAAGATGGGAACAAATCTCAGAAACATGAAGCTCACTCTCGTGGCAAGCAGAATAAACACTCAGGTGTAAAAGATTTGGGAAAGTCCTCTTACGGTGGTAACGGCCAGAACAATGGGGCATTTAGACGATCAGCAGCTTCAAATTGGTTGTTGCTTATCAACAAGCTCTCAAAGAAGTCCCTGTTACCTGTGGTTGTCTTCTGTTTCTCGAAGAATTATTGCGATAGGTGTGCTGACGCTTTGACTGGGACTGATCTTACTAGTAGTTCTGAGAAAAGTGAAATCCGTGTCTTCTGCGACAAAGCTTTTTCGAGATTAAAAGGGTCTGATCGGAATTTACCTCAGGTCCTCCGAGTCCAAAGCCTACTTCATAGAGGAATCGGTGTTCATCATGCTGGGCTGCTTCCAATAGTAAAGGAAGTTGTTGAAATGCTCTTTTGCCGTGGTGTCATTAAGGTGCTATTTTCAACGGAGACATTCGCTATGGGGGTTAATGCTCCAGCTAGAACGGTTGTTTTTGATGCTTTGAGGAAGTTTGATGGAAAGGAATTCAGATCGTTGCTTCCTGGAGAGTACACTCAAATGGCAGGGCGTGCTGGCAGAAGAGGACTTGACAAAACTGGCACAGTTATTGTCATGTGTCGCGATGAAGTTCCAGATGAGAATGATCTGAGGCGTATAATTGTTGGAAGCGCAACAAGACTAGAATCTCAGTTCCGATTAACCTACATAATGATCCTCCATCTTTTACGTGTTGAAGAATTGAAGGTGGAAGACATGCTGAAAAGAAGTTTTGCTGAATTCCATGCTCAAAAGAAGCTGCCCGAGAAACAACAACTTCTCATGCTGAAACGTTCTCTACCAGTCAAAAATATTGAATGTATTAAAGGAGAACCAGCAATTGAAGATTACTTTGAGATGTATATGGAAGCAAACGAATGTAACAGTAAAATGTCAGAAGCAGTCATGCAGTCTCCTAATGCCCAGCAACATCTTGTAACCGGAAGAGTAGTGGTCATGAAATCTGAAACGGGCATAGACAATTTACTTGGAGTCGTACTGAAGGGACTTCCAAACAGGCAATATGTTGTTTTGGTGATAAAATCTGAAATTCCACCACCAGAGAAAAATATGGTTCTCATTGGCAAGAAAAGCTCAGATCCCTCTCAGGGTTTCTTTATTGCGCCCAAGTCAAAACGTGCTGTTGAGGATGATTATTATTCGACAACCAGCTCTCGAAAAGGCACCGGTGTTATCAAGATAGAGCTCCCGTACCATGGAGCCGCTGCTGGTGTAGGGTACGAGGTCAGAGCGTTTGATAACAAAGAATTCTTGTGTATATGCGTTAGCAAGATAAAGATCGATCAGGTGCGTCTACTCGAGGATGGGAACAAGACAGCTTTTTCTCAGACGGTTCAACAGCTTTTGGATCTGAAATCAGACGGAAACAAGTTTCCTCCTGCTCTAGACCCAGTTAAAGATTTGAAGCTGAAAGATGCTGAGCTTGTGGAGACTTACTATAAATGGACCAGCTTGTTACAAAAGATGTCCATGAATAAGTGCCACGGTTGTGTCAAATTGGATGAGCACATGAAGCTAGCTAGGGAGATTAGGAAGCATAAGAAAGATCTCAAAGATCTCGAATTCCAAATGTCTGATGAAGCCCTATTACAGATGCCTGCGTTTCAGGGCAGGATCGATGTTCTGAAGAAAATAGGGTGTATAGATGATGACCTCGTCGTCCAAATCAAAGGCCGTGTCGCTTGCGAGATGAACTCTGGGGAAGAATTGATTTGTACAGTATGTCTGTTCGAGAATCAGTTCGAAGAATTGGAACCAGAAGAAGCAGTGGCTATAATGTCTGCCTTTGTCTTCCAACAGAAAAACACTTCGGCGCCTTCACTTACTCCCAAACTGGCCAAGGCTAAGCAAAGAGTCTATGATACAGCAATCAGACTTGGTGAGCTTCAAGCTCATTACAACTTACAAATAGACCCTGAGGAATATGCACAGGAGAATCTCAAATTTGGTCTGGTCGAAGTCGTTTATGAATGGGCAAAGGGGACTCCGTTTGCAGAGATATGTGAATTGACAGATGTCCCTGAAGGTCTGATAGTTCGGACCATTGTGAGACTAGACGAGACGTGCCGTGAGTTCAAGAACGCAGCCGCCATTATGGGGAACTCCGCGTTACACAAGAAAATGGATTCTGCTTCGAACGCTATAAAACGCGACATCGTGTTTGCTGCTAGTCTGTATGTGACTGGAGTGTAA
Protein:  
MNRFEAANELAFRVGISGHGGHLRVEPLYTAESDVAVNSLPDFVSPPAFAKETKESIKEHIEEKYLLPRLEPEQFSAENAENQWDFDWFARVKVPLQPSLPRSVVVPTWELPFRRQKLDTERNGRWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSANNRPFRPGGLEDSQSSERILPDGVCDGRWVRELLNGGPAQNVPPSFKQSLDLGDLMPHPQAWNVYEDQSLHGNASDEKSSKLSIQFDDLFKTVLEEDTVFELEGDDHSAGSESPKAEAEPEPEASKGRETIKGTETDITVLDEILSSAKTAILSDEAITGNNGKQLRKEGWATKGDSQDIADRFHELVPDMAMEFPFELDIFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVVFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFISKGIKDAKDAHKKKNSSAVSVGPKQYTGSSAHQDGNKSQKHEAHSRGKQNKHSGVKDLGKSSYGGNGQNNGAFRRSAASNWLLLINKLSKKSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRVQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRSLLPGEYTQMAGRAGRRGLDKTGTVIVMCRDEVPDENDLRRIIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMLKRSLPVKNIECIKGEPAIEDYFEMYMEANECNSKMSEAVMQSPNAQQHLVTGRVVVMKSETGIDNLLGVVLKGLPNRQYVVLVIKSEIPPPEKNMVLIGKKSSDPSQGFFIAPKSKRAVEDDYYSTTSSRKGTGVIKIELPYHGAAAGVGYEVRAFDNKEFLCICVSKIKIDQVRLLEDGNKTAFSQTVQQLLDLKSDGNKFPPALDPVKDLKLKDAELVETYYKWTSLLQKMSMNKCHGCVKLDEHMKLAREIRKHKKDLKDLEFQMSDEALLQMPAFQGRIDVLKKIGCIDDDLVVQIKGRVACEMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPSLTPKLAKAKQRVYDTAIRLGELQAHYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALHKKMDSASNAIKRDIVFAASLYVTGV